Dry Aligning Dilute Active Matter Chaté, Hugues
Annual review of condensed matter physics,
03/2020, Letnik:
11, Številka:
1
Journal Article
Recenzirano
Odprti dostop
Active matter physics is about systems in which energy is dissipated at some local level to produce work. This is a generic situation, particularly in the living world but not only. What is at stake ...is the understanding of the fascinating, sometimes counterintuitive, emerging phenomena observed, from collective motion in animal groups to in vitro dynamical self-organization of motor proteins and biofilaments.
Dry aligning dilute active matter (DADAM) is a corner of the multidimensional, fast-growing domain of active matter that has both historical and theoretical importance for the entire field. This restrictive setting only involves self-propulsion/activity, alignment, and noise, yet unexpected collective properties can emerge from it.
This review provides a personal but synthetic and coherent overview of DADAM, focusing on the collective-level phenomenology of simple active particle models representing basic classes of systems and on the solutions of the continuous hydrodynamic theories that can be derived from them. The obvious fact that orientational order is advected by the aligning active particles at play is shown to be at the root of the most striking properties of DADAM systems: (
a
) direct transitions to orientational order are not observed; (
b
) instead generic phase separation occurs with a coexistence phase involving inhomogeneous nonlinear structures; (
c
) orientational order, which can be long range even in two dimensions, is accompanied by long-range correlations and anomalous fluctuations; (
d
) defects are not point-like, topologically bound objects.
In microtubule-based active nematics, motor-driven extensile motion of microtubule bundles powers chaotic large-scale dynamics. We quantify the interfilament sliding motion both in isolated bundles ...and in a dense active nematic. The extension speed of an isolated microtubule pair is comparable to the molecular motor stepping speed. In contrast, the net extension in dense 2D active nematics is significantly slower; the interfilament sliding speeds are widely distributed about the average and the filaments exhibit both contractile and extensile relative motion. These measurements highlight the challenge of connecting the extension rate of isolated bundles to the multimotor and multifilament interactions present in a dense 2D active nematic. They also provide quantitative data that is essential for building multiscale models.
Active matter comprises individual units that convert energy into mechanical motion. In many examples, such as bacterial systems and biofilament assays, constituent units are elongated and can give ...rise to local nematic orientational order. Such “active nematics” systems have attracted much attention from both theorists and experimentalists. However, despite intense research efforts, data-driven quantitative modeling has not been achieved, a situation mainly due to the lack of systematic experimental data and to the large number of parameters of current models. Here, we introduce an active nematics system made of swarming filamentous bacteria. We simultaneously measure orientation and velocity fields and show that the complex spatiotemporal dynamics of our system can be quantitatively reproduced by a type of microscopic model for active suspensions whose important parameters are all estimated from comprehensive experimental data. This provides unprecedented access to key effective parameters and mechanisms governing active nematics. Our approach is applicable to different types of dense suspensions and shows a path toward more quantitative active matter research.
A nonequilibrium force can stabilize 2D active nematics Maitra, Ananyo; Srivastava, Pragya; Marchetti, M. Cristina ...
Proceedings of the National Academy of Sciences - PNAS,
07/2018, Letnik:
115, Številka:
27
Journal Article
Recenzirano
Odprti dostop
Suspensions of actively driven anisotropic objects exhibit distinctively nonequilibrium behaviors, and current theories predict that they are incapable of sustaining orientational order at high ...activity. By contrast, here we show that nematic suspensions on a substrate can display order at arbitrarily high activity due to a previously unreported, potentially stabilizing active force. This force moreover emerges inevitably in theories of active orientable fluids under geometric confinement. The resulting nonequilibrium ordered phase displays robust giant number fluctuations that cannot be suppressed even by an incompressible solvent. Our results apply to virtually all experimental assays used to investigate the active nematic ordering of self-propelled colloids, bacterial suspensions, and the cytoskeleton and have testable implications in interpreting their nonequilibrium behaviors.
We investigate the effects of extrinsic curvature on the turbulent behavior of a 2D active nematic confined to the surface of a cylinder. The surface of a cylinder has no intrinsic curvature and only ...extrinsic curvature. A nematic field reacts to the extrinsic curvature by trying to align with the lowest principle curvature, in this case parallel to the long axis of the cylinder. When nematics are sufficiently active, there is a proliferation of defects arising from a bend or splay instability depending on the nature of the active stress. The extrinsic curvature of the cylinder breaks the rotational symmetry of this process, implying that defects are created parallel or perpendicular to the cylinder depending on whether the active nematic is contractile or extensile.
Active nematics can be modeled using phenomenological continuum theories that account for the dynamics of the nematic director and fluid velocity through partial differential equations (PDEs). While ...these models provide a statistical description of the experiments, the relevant terms in the PDEs and their parameters are usually identified indirectly. We adapt a recently developed method to automatically identify optimal continuum models for active nematics directly from spatiotemporal data, via sparse regression of the coarse-grained fields onto generic low order PDEs. After extensive benchmarking, we apply the method to experiments with microtubule-based active nematics, finding a surprisingly minimal description of the system. Our approach can be generalized to gain insights into active gels, microswimmers, and diverse other experimental active matter systems.
In nature, interactions between biopolymers and motor proteins give rise to biologically essential emergent behaviors. Besides cytoskeleton mechanics, active nematics arise from such interactions. ...Here we present a study on 3D active nematics made of microtubules, kinesin motors, and depleting agent. It shows a rich behavior evolving from a nematically ordered space-filling distribution of microtubule bundles toward a flattened and contracted 2D ribbon that undergoes a wrinkling instability and subsequently transitions into a 3D active turbulent state. The wrinkle wavelength is independent of the ATP concentration and our theoretical model describes its relation with the appearance time. We compare the experimental results with a numerical simulation that confirms the key role of kinesin motors in cross-linking and sliding the microtubules. Our results on the active contraction of the network and the independence of wrinkle wavelength on ATP concentration are important steps forward for the understanding of these 3D systems.
A surface in contact with the isotropic phase of a passive liquid crystal can induce nematic order over distances that range from microscopic to macroscopic when the nematic-isotropic interface ...undergoes an orientational-wetting transition. If the nematic is active, what happens to the interface? Does it propagate and, if it does, is its structure different from the passive one? In this paper, we address these questions. We investigate how the active nematic-isotropic interface is affected by the anchoring strength of the surface, the bulk ordering field and the activity. We find that while passive interfaces are one-dimensional the active ones exhibit two dynamical regimes: a passive-like regime and a propagating regime where the interfaces propagate until the entire domain is active nematic. Active interfaces break the translational symmetry within the interfacial plane above a threshold activity, where the active nematic fluctuations, which are ultimately responsible for the emergence of an active turbulent nematic phase, drive non-steady dynamical interfacial regimes.
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