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  • riboCIRC: a comprehensive d...
    Li, Huihui; Xie, Mingzhe; Wang, Yan; Yang, Ludong; Xie, Zhi; Wang, Hongwei

    Genome Biology, 03/2021, Letnik: 22, Številka: 1
    Journal Article

    riboCIRC is a translatome data-oriented circRNA database specifically designed for hosting, exploring, analyzing, and visualizing translatable circRNAs from multi-species. The database provides a comprehensive repository of computationally predicted ribosome-associated circRNAs; a manually curated collection of experimentally verified translated circRNAs; an evaluation of cross-species conservation of translatable circRNAs; a systematic de novo annotation of putative circRNA-encoded peptides, including sequence, structure, and function; and a genome browser to visualize the context-specific occupant footprints of circRNAs. It represents a valuable resource for the circRNA research community and is publicly available at http://www.ribocirc.com .