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  • Estimating the Medical Care... Estimating the Medical Care Costs of Obesity in the United States: Systematic Review, Meta-Analysis, and Empirical Analysis
    Kim, David D., MS; Basu, Anirban, PhD Value in health, 07/2016, Volume: 19, Issue: 5
    Journal Article
    Peer reviewed
    Open access

    Abstract Background The prevalence of adult obesity exceeds 30% in the United States, posing a significant public health concern as well as a substantial financial burden. Although the impact of ...
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  • Amelioration of sepsis by TIE2 activation-induced vascular protection
    Han, Sangyeul; Lee, Seung-Jun; Kim, Kyung Eun ... Science translational medicine, 04/2016, Volume: 8, Issue: 335
    Journal Article
    Peer reviewed

    Protection of endothelial integrity has been recognized as a frontline approach to alleviating sepsis progression, yet no effective agent for preserving endothelial integrity is available. Using an ...
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  • Periodontal Soft Tissue Non... Periodontal Soft Tissue Non–Root Coverage Procedures: A Systematic Review From the AAP Regeneration Workshop
    Kim, David M.; Neiva, Rodrigo Journal of periodontology (1970), February 2015, 2015-Feb, 2015-02-00, 20150201, Volume: 86, Issue: 2 Suppl
    Journal Article
    Peer reviewed

    Background: Gingival augmentation procedures around natural teeth and dental implants are performed to facilitate plaque control, to improve patient comfort, to prevent future recession, and in ...
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  • Automatic structure predict... Automatic structure prediction of oligomeric assemblies using Robetta in CASP12
    Park, Hahnbeom; Kim, David E.; Ovchinnikov, Sergey ... Proteins, March 2018, Volume: 86, Issue: S1
    Journal Article
    Peer reviewed
    Open access

    Many naturally occurring protein systems function primarily as symmetric assemblies. Prediction of the quaternary structure of these assemblies is an important biological problem. This article ...
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  • Protein structure determina... Protein structure determination using metagenome sequence data
    Ovchinnikov, Sergey; Park, Hahnbeom; Varghese, Neha ... Science, 01/2017, Volume: 355, Issue: 6322
    Journal Article
    Peer reviewed
    Open access

    Despite decades of work by structural biologists, there are still ~5200 protein families with unknown structure outside the range of comparative modeling. We show that Rosetta structure prediction ...
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  • Identifying Novel Molecular... Identifying Novel Molecular Genetic Markers in Attention Deficit Hyperactivity Disorder and Glioblastoma Multiforme
    Kim, David T. The FASEB journal, 20/May , Volume: 36, Issue: S1
    Journal Article
    Peer reviewed

    Attention deficit hyperactivity disorder (ADHD) and glioblastoma multiforme (GBM) are two neurological disorders with high rates of incidence and mortality respectively, both capable of inflicting ...
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  • Protein structure predictio... Protein structure prediction using Rosetta in CASP12
    Ovchinnikov, Sergey; Park, Hahnbeom; Kim, David E. ... Proteins, March 2018, Volume: 86, Issue: S1
    Journal Article
    Peer reviewed
    Open access

    We describe several notable aspects of our structure predictions using Rosetta in CASP12 in the free modeling (FM) and refinement (TR) categories. First, we had previously generated (and published) ...
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  • Simultaneous Optimization o... Simultaneous Optimization of Biomolecular Energy Functions on Features from Small Molecules and Macromolecules
    Park, Hahnbeom; Bradley, Philip; Greisen, Jr, Per ... Journal of chemical theory and computation, 12/2016, Volume: 12, Issue: 12
    Journal Article
    Peer reviewed
    Open access

    Most biomolecular modeling energy functions for structure prediction, sequence design, and molecular docking have been parametrized using existing macromolecular structural data; this contrasts ...
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