The article presents the results of an assessment of the hydromorphological state of selected Carpathian rivers in sections above and below the reservoirs. An attempt has also been made to assess the impact of reservoirs on the hydromorphological conditions and quality of river habitats. The research was based on the River Habitat Survey (RHS) method. The synthetic indices Habitat Quality Assessment (HQA) and Habitat Modification Score (HMS) were calculated on the basis of the gathered data for each section studied; this allowed the hydromorphological qualities of the rivers to be assessed numerically. The reservoirs interrupt river continuum, and they alter different biotic and abiotic elements of natural environment. However, this study has shown that the operation of reservoirs does not always negatively impact the hydromorphological conditions of rivers that reflect their habitat quality. The influence of reservoirs on a river's hydromorphological state above and below a reservoir's location may be neutral, but it also can improve the habitat conditions of a river.