Cryoturbated peat circles (that is, bare surface soil mixed by frost action; pH 3-4) in the Russian discontinuous permafrost tundra are nitrate-rich 'hotspots' of nitrous oxide (N(2)O) emissions in ...arctic ecosystems, whereas adjacent unturbated peat areas are not. N(2)O was produced and subsequently consumed at pH 4 in unsupplemented anoxic microcosms with cryoturbated but not in those with unturbated peat soil. Nitrate, nitrite and acetylene stimulated net N(2)O production of both soils in anoxic microcosms, indicating denitrification as the source of N(2)O. Up to 500 and 10 μM nitrate stimulated denitrification in cryoturbated and unturbated peat soils, respectively. Apparent maximal reaction velocities of nitrite-dependent denitrification were 28 and 18 nmol N(2)O g(DW)(-1) h(-1), for cryoturbated and unturbated peat soils, respectively. Barcoded amplicon pyrosequencing of narG, nirK/nirS and nosZ (encoding nitrate, nitrite and N(2)O reductases, respectively) yielded ≈49 000 quality-filtered sequences with an average sequence length of 444 bp. Up to 19 species-level operational taxonomic units were detected per soil and gene, many of which were distantly related to cultured denitrifiers or environmental sequences. Denitrification-associated gene diversity in cryoturbated and in unturbated peat soils differed. Quantitative PCR (inhibition-corrected per DNA extract) revealed higher copy numbers of narG in cryoturbated than in unturbated peat soil. Copy numbers of nirS were up to 1000 × higher than those of nirK in both soils, and nirS nirK(-1) copy number ratios in cryoturbated and unturbated peat soils differed. The collective data indicate that the contrasting N(2)O emission patterns of cryoturbated and unturbated peat soils are associated with contrasting denitrifier communities.
The regional variability in tundra and boreal carbon dioxide (CO2) fluxes can be high, complicating efforts to quantify sink‐source patterns across the entire region. Statistical models are ...increasingly used to predict (i.e., upscale) CO2 fluxes across large spatial domains, but the reliability of different modeling techniques, each with different specifications and assumptions, has not been assessed in detail. Here, we compile eddy covariance and chamber measurements of annual and growing season CO2 fluxes of gross primary productivity (GPP), ecosystem respiration (ER), and net ecosystem exchange (NEE) during 1990–2015 from 148 terrestrial high‐latitude (i.e., tundra and boreal) sites to analyze the spatial patterns and drivers of CO2 fluxes and test the accuracy and uncertainty of different statistical models. CO2 fluxes were upscaled at relatively high spatial resolution (1 km2) across the high‐latitude region using five commonly used statistical models and their ensemble, that is, the median of all five models, using climatic, vegetation, and soil predictors. We found the performance of machine learning and ensemble predictions to outperform traditional regression methods. We also found the predictive performance of NEE‐focused models to be low, relative to models predicting GPP and ER. Our data compilation and ensemble predictions showed that CO2 sink strength was larger in the boreal biome (observed and predicted average annual NEE −46 and −29 g C m−2 yr−1, respectively) compared to tundra (average annual NEE +10 and −2 g C m−2 yr−1). This pattern was associated with large spatial variability, reflecting local heterogeneity in soil organic carbon stocks, climate, and vegetation productivity. The terrestrial ecosystem CO2 budget, estimated using the annual NEE ensemble prediction, suggests the high‐latitude region was on average an annual CO2 sink during 1990–2015, although uncertainty remains high.
We synthesized eddy covariance and chamber measurements of annual and growing season carbon dioxide (CO2) fluxes from 148 terrestrial high‐latitude (i.e., tundra and boreal) sites. We used statistical models to predict terrestrial ecosystem CO2 fluxes across the region over 1990–2015. Average annual net ecosystem CO2 sink strength was generally strong in the boreal biome but decreased with increasing latitude towards the tundra which was nearly neutral. Uncertainties remained high, but our results suggest that the high‐latitude region was on average an annual terrestrial ecosystem CO2 sink.
Permafrost in the Arctic is thawing, exposing large carbon and nitrogen stocks for decomposition. Gaseous carbon release from Arctic soils due to permafrost thawing is known to be substantial, but ...growing evidence suggests that Arctic soils may also be relevant sources of nitrous oxide (N₂O). Here we show that N2O emissions from subarctic peatlands increase as the permafrost thaws. In our study, the highest postthaw emissions occurred from bare peat surfaces, a typical landform in permafrost peatlands, where permafrost thaw caused a fivefold increase in emissions (0.56 ± 0.11 vs. 2.81 ± 0.6 mg N₂O m−2 d−1). These emission rates match those from tropical forest soils, the world’s largest natural terrestrial N₂O source. The presence of vegetation, known to limit N₂O emissions in tundra, did decrease (by ∼90%) but did not prevent thaw-induced N₂O release, whereas waterlogged conditions suppressed the emissions. We show that regions with high probability for N₂O emissions cover one-fourth of the Arctic. Our results imply that the Arctic N₂O budget will depend strongly on moisture changes, and that a gradual deepening of the active layer will create a strong noncarbon climate change feedback.
Ecosystem carbon (C) dynamics after permafrost thaw depends on more than just climate change since soil nutrient status may also impact ecosystem C balance. It has been advocated that nitrogen (N) ...release upon permafrost thaw could promote plant growth and thus offset soil C loss. However, compared with the widely accepted C‐N interactions, little is known about the potential role of soil phosphorus (P) availability. We combined 3‐year field observations along a thaw sequence (constituted by four thaw stages, i.e., non‐collapse and 5, 14, and 22 years since collapse) with an in‐situ fertilization experiment (included N and P additions at the level of 10 g N m−2 year−1 and 10 g P m−2 year−1) to evaluate ecosystem C‐nutrient interactions upon permafrost thaw. We found that changes in soil P availability rather than N availability played an important role in regulating gross primary productivity and net ecosystem productivity along the thaw sequence. The fertilization experiment confirmed that P addition had stronger effects on plant growth than N addition in this permafrost ecosystem. These two lines of evidence highlight the crucial role of soil P availability in altering the trajectory of permafrost C cycle under climate warming.
Ecosystem carbon (C) dynamics after permafrost thaw could be impacted by soil nutrient status. However, current understanding of C‐nutrient interactions in permafrost ecosystems concentrates on nitrogen (N), little is known about the potential role of phosphorus (P) in mediating ecosystem C dynamics upon permafrost thaw. Based on the combination of 3‐year field observations along a permafrost thaw sequence with an in‐situ fertilization experiment, this study provided empirical evidence that soil P rather than N availability regulates ecosystem C dynamics after permafrost thaw, highlighting the key role of P in regulating the future trajectory of permafrost C cycle.
Bare peat surfaces created by frost action and wind erosion in permafrost peatlands have been shown to emit high amounts of nitrous oxide (N2O). With global warming, emissions of this highly potent ...greenhouse gas are expected to increase in Arctic permafrost peatlands. In natural unmanaged soils with low nitrogen deposition, such as Arctic soils, nitrification is the main source of nitrite and nitrate, and thus a key driver of N2O emissions. Here, we investigated nitrification, ammonia oxidizer populations and N2O production in vegetated and bare peat soils from four distant Arctic geographic locations. Through a combination of molecular analyses and group-specific inhibitor assays, we show that ammonia oxidation, the first step in nitrification, is mainly performed by ammonia-oxidizing archaea (AOA). All soils from different locations, including bare peat soils with high N2O emissions, harbored only two AOA phylotypes, including an organism closely related to Ca. Nitrosocosmicus spp. This indicates that high N2O emissions from these ecosystems are primarily fueled by nitrification mediated by very few archaeal species. To our knowledge, arctic peat soils in this study are the first natural environments where high N2O emissions have been linked to AOA. Any changes in archaeal nitrification induced by global warming will therefore impact on N2O emissions from the permafrost peatlands.
•Ammonia-oxidizing archaea (AOA) are driving nitrification in Arctic peat soils which have high N2O emissions.•Arctic peat soils have with only two AOA phylotypes surprisingly low diversity of AOA.•AOA are important key species for nitrification in Arctic peat soils.
Permafrost peatlands are biogeochemical hot spots in the Arctic as they store vast amounts of carbon. Permafrost thaw could release part of these long‐term immobile carbon stocks as the greenhouse ...gases (GHGs) carbon dioxide (CO2) and methane (CH4) to the atmosphere, but how much, at which time‐span and as which gaseous carbon species is still highly uncertain. Here we assess the effect of permafrost thaw on GHG dynamics under different moisture and vegetation scenarios in a permafrost peatland. A novel experimental approach using intact plant–soil systems (mesocosms) allowed us to simulate permafrost thaw under near‐natural conditions. We monitored GHG flux dynamics via high‐resolution flow‐through gas measurements, combined with detailed monitoring of soil GHG concentration dynamics, yielding insights into GHG production and consumption potential of individual soil layers. Thawing the upper 10–15 cm of permafrost under dry conditions increased CO2 emissions to the atmosphere (without vegetation: 0.74 ± 0.49 vs. 0.84 ± 0.60 g CO2–C m−2 day−1; with vegetation: 1.20 ± 0.50 vs. 1.32 ± 0.60 g CO2–C m−2 day−1, mean ± SD, pre‐ and post‐thaw, respectively). Radiocarbon dating (14C) of respired CO2, supported by an independent curve‐fitting approach, showed a clear contribution (9%–27%) of old carbon to this enhanced post‐thaw CO2 flux. Elevated concentrations of CO2, CH4, and dissolved organic carbon at depth indicated not just pulse emissions during the thawing process, but sustained decomposition and GHG production from thawed permafrost. Oxidation of CH4 in the peat column, however, prevented CH4 release to the atmosphere. Importantly, we show here that, under dry conditions, peatlands strengthen the permafrost–carbon feedback by adding to the atmospheric CO2 burden post‐thaw. However, as long as the water table remains low, our results reveal a strong CH4 sink capacity in these types of Arctic ecosystems pre‐ and post‐thaw, with the potential to compensate part of the permafrost CO2 losses over longer timescales.
Permafrost peatlands are biogeochemical hot spots in the Arctic as they store vast amounts of carbon. Permafrost thaw could release part of these long‐term immobile carbon stocks as the greenhouse gases (GHGs) carbon dioxide (CO2) and methane (CH4) to the atmosphere, but how much, at which time‐span and as which gaseous carbon species is still highly uncertain. A novel experimental approach using intact plant–soil systems (mesocosms) allowed us to simulate permafrost thaw under near‐natural conditions. We show here that peatlands may strengthen the permafrost–carbon feedback by adding to the atmospheric CO2 burden post‐thaw.
Abstract
The paradigm that permafrost-affected soils show restricted mineral nitrogen (N) cycling in favor of organic N compounds is based on the observation that net N mineralization rates in these ...cold climates are negligible. However, we find here that this perception is wrong. By synthesizing published data on N cycling in the plant-soil-microbe system of permafrost ecosystems we show that gross ammonification and nitrification rates in active layers were of similar magnitude and showed a similar dependence on soil organic carbon (C) and total N concentrations as observed in temperate and tropical systems. Moreover, high protein depolymerization rates and only marginal effects of C:N stoichiometry on gross N turnover provided little evidence for N limitation. Instead, the rather short period when soils are not frozen is the single main factor limiting N turnover. High gross rates of mineral N cycling are thus facilitated by released protection of organic matter in active layers with nitrification gaining particular importance in N-rich soils, such as organic soils without vegetation. Our finding that permafrost-affected soils show vigorous N cycling activity is confirmed by the rich functional microbial community which can be found both in active and permafrost layers. The high rates of N cycling and soil N availability are supported by biological N fixation, while atmospheric N deposition in the Arctic still is marginal except for fire-affected areas. In line with high soil mineral N production, recent plant physiological research indicates a higher importance of mineral plant N nutrition than previously thought. Our synthesis shows that mineral N production and turnover rates in active layers of permafrost-affected soils do not generally differ from those observed in temperate or tropical soils. We therefore suggest to adjust the permafrost N cycle paradigm, assigning a generally important role to mineral N cycling. This new paradigm suggests larger permafrost N climate feedbacks than assumed previously.
Nitrogen regulates multiple aspects of the permafrost climate feedback, including plant growth, organic matter decomposition, and the production of the potent greenhouse gas nitrous oxide. Despite ...its importance, current estimates of permafrost nitrogen are highly uncertain. Here, we compiled a dataset of >2000 samples to quantify nitrogen stocks in the Yedoma domain, a region with organic-rich permafrost that contains ~25% of all permafrost carbon. We estimate that the Yedoma domain contains 41.2 gigatons of nitrogen down to ~20 metre for the deepest unit, which increases the previous estimate for the entire permafrost zone by ~46%. Approximately 90% of this nitrogen (37 gigatons) is stored in permafrost and therefore currently immobile and frozen. Here, we show that of this amount, ¾ is stored >3 metre depth, but if partially mobilised by thaw, this large nitrogen pool could have continental-scale consequences for soil and aquatic biogeochemistry and global-scale consequences for the permafrost feedback.
Abstract
Permafrost regions, characterised by extensive belowground excess ice, are highly vulnerable to rapid thaw, particularly in areas such as the Yedoma domain. This region is known to ...freeze-lock a globally significant stock of soil nitrogen (N). However, the fate of this N upon permafrost thaw remains largely unknown. In this study, we assess the impact of climate warming on the size and dynamics of the soil N pool in (sub-)Arctic ecosystems, drawing upon recently published data and literature. Our findings suggest that climate warming and increased thaw depths will result in an expansion of the reactive soil N pool due to the larger volume of (seasonally) thawed soil. Dissolved organic N emerges as the predominant N form for rapid cycling within (sub-)Arctic ecosystems. The fate of newly thawed N from permafrost is primarily influenced by plant uptake, microbial immobilisation, changes in decomposition rates due to improved N availability, as well as lateral flow. The Yedoma domain contains substantial N pools, and the partial but increasing thaw of this previously frozen N has the potential to amplify climate feedbacks through additional nitrous oxide (N
2
O) emissions. Our ballpark estimate indicates that the Yedoma domain may contribute approximately 6% of the global annual rate of N
2
O emissions from soils under natural vegetation. However, the released soil N could also mitigate climate feedbacks by promoting enhanced vegetation carbon uptake. The likelihood and rate of N
2
O production are highest in permafrost thaw sites with intermediate moisture content and disturbed vegetation, but accurately predicting future landscape and hydrology changes in the Yedoma domain remains challenging. Nevertheless, it is evident that the permafrost-climate feedback will be significantly influenced by the quantity and mobilisation state of this unconsidered N pool.
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