Ostracod shells are used extensively in paleontology, but we know little about their evolution, especially in ancient lakes. Lake Baikal (LB) is the world's most important stronghold of Candonidae ...diversity. These crustaceans radiated here rapidly (12-5 Ma) and with an unprecedented morphological diversity. We reconstruct their molecular phylogeny with 46 species and two markers (18S and 16S rRNA), and use it to estimate the evolution of the shell shape and size with landmark-based geometric morphometrics (LBGM). High posterior probabilities support four major clades, which differ in node depth and morphospace clustering. After removing a significant allometry, the first three principal components (PCs) describe about 88% of total variability, suggesting a strong integration. Reconstructed ancestral shapes are similar for all four clades, indicating that diversification happened after colonization. Major evolutionary changes occurred from trapezoidal to elongated shapes. Sister species are separated in morphospace, by centroid size, or both, as well as by vertical and horizontal distributions in LB. Ostracod shell is a strongly integrated structure that exhibits high evolvability, with some extreme shapes, although mostly along the first PC. This is the first study that combines molecular phylogeny and LBGM for ostracods and for any LB group.
A new species of the family Planorbidae is described from the land thermal spring Khakusy, on the north-eastern shore of Lake Baikal. The description of
includes morphological characters and gene ...sequences (COI of mtDNA) for the species separation from sister taxon
(A. Férussac, 1807) collected from the small Krestovka River in-flowing into the south-western part of the Lake. The new species differs from
in small shell size of adults, having smaller number of prostate folds (maximal up to 26 in
n. sp. vs. 40 in
), a short preputium (approximately twice shorter than the phallotheca), and an elongated bursa copulatrix. The population of
consists of two co-existent morphs: one of them has a narrow shell spire and the second is characterized by wide spire similar to the shell of
. One of the two revealed haplotypes of the new species includes both morphs, while the second consists of snails with wide spired shells.
The taxonomic position and phylogenetic affinities of the endemic North Asian genus Kolhymamnicola Starobogatov and Budnikova, 1976 (Gastropoda: Amnicolidae) remain unknown. To resolve this, we ...studied key morpho-anatomical characteristics of Kolhymamnicola snails and performed a molecular phylogenetic analysis based on sequences of COI mtDNA, 16S rRNA, and 18S rRNA genes. In terms of protoconch microsculpture, operculum, radular teeth, and gill complex morphology, Kolhymamnicola snails do not differ significantly from the North American genera Amnicola Gould and Haldeman, 1840 and Taylorconcha Hershler et al., 1994, and the European genus Marstoniopsis van Regteren Altena 1936. The bifid penis found in Kolhymamnicola is similar to that in the genus Marstoniopsis. The female reproductive anatomy has some features shared by Kolhymamnicola and Taylorconcha (absence of bursa copulatrix, single seminal receptacle in rs2′ position, and ventral channel). The molecular analysis has revealed Taylorconcha as the closest relative to Kolhymamnicola; the COI-based genetic distance between them amounted to 0.113. We discuss the possible time of divergence of these two genera, as well as of European Marstoniopsis and the Baikal Lake endemic family Baicaliidae. The last common ancestor of these groups was widely distributed in Miocene–Pliocene in the Holarctic waterbodies. Recent Kolhymamnicola snails are distributed in Northern Asia, including lakes of the Baikal rift zone. We rank the Baicaliidae as a family rather than a subfamily of Amnicolidae based on their distinct, unique morpho-anatomical characteristics and highly supported separate position on the molecular tree. The tribe Erhaiini Davis and Kuo, 1985 is elevated to the rank of the family, with 3–4 recent genera included. The family Palaeobaicaliidae Sitnikova et Vinarski fam. nov. is established to embrace the Cretaceous North Asian gastropods conchologically similar to the recent Baicaliidae and Pyrgulidae.
This article aims to reconstruct the invasion of the ear-shaped pond snail, Radix auricularia (Linnaeus, 1758), to Lake Baikal, East Siberia. This species is widely distributed in the Palaearctic and ...Northern America, and since the early 20th century has formed abundant and sustained populations in Lake Baikal. The data provided on the morphological and genetic variability of R. auricularia help to better describe and delineate the species. With an integrative approach involving morphological and molecular data, we improved the knowledge of the intraspecific variability of R. auricularia in the most important characteristics used for its determination. Molecular sequences of nuclear spacer fragment ITS-2 and mitochondrial gene fragment cyt–b were obtained from 32 individuals of Radix (including seven outgroup Radix species) collected from various parts of Lake Baikal and adjacent waterbodies and compared with sequences of 32 individuals of R. auricularia from different regions of the Palaearctic as well as with individuals determinated as R. intercisa from Lake Baikal, R. iturupica from the Kurile Islands, R. ussuriensis from the Khabarovsk region, R. narzykulovi from Tajikistan, and R. schubinae from the Amur region. Molecular genetic analyses revealed that all specimens collected from Lake Baikal belong to R. auricularia. There are no genetically distinct groups of snails that would correspond to two morphospecies previously recorded in Lake Baikal (e.g., R. auricularia s. str. and R. intercisa). Variability of the characteristics that are commonly used for species identification (shell morphology, mantle pigmentation, shape and position of the bursa copulatrix, length and position of the bursa duct, length ratio of preputium to penial sheath) were found in individuals analysed with molecular genetics to be broader than recognised in the current literature. Some shells of R. auricularia collected from Lake Baikal resemble shells of another lymnaeid species, R. balthica, and without molecular assessment can be confused with the latter. Geometric morphometric analysis of more than 250 shells revealed no observed hiatus between Baikalian and non-Baikalian R. auricularia. The probable stages and pathways of R. auricularia invasion to Lake Baikal’s ecosystem are outlined and discussed. Factors such as global climate warming and human activity stimulated and facilitated the ongoing dispersal of ear pond snails within Lake Baikal.
Islands have traditionally been the centre of evolutionary biological research, but the dynamics of immigration and differentiation at continental islands have not been well studied. Therefore, we ...focused on the Japanese archipelago, the continental islands located at the eastern end of the Eurasian continent. While the Japanese archipelago is characterised by high biodiversity and rich freshwater habitats, the origin and formation mechanisms of its freshwater organisms are not clear. In order to clarify the history of the planorbid gastropod fauna, we conducted phylogenetic analysis, divergence time estimation, ancestral state reconstruction, and lineage diversity estimations.
Our analyses revealed the formation process of the planorbid fauna in the Japanese archipelago. Most lineages in the Japanese archipelago have closely related lineages on the continent, and the divergence within the Japanese lineages presumably occurred after the late Pliocene. In addition, each lineage is characterised by different phylogeographical patterns, suggesting that immigration routes from the continent to the Japanese archipelago differ among lineages. Furthermore, a regional lineage diversity plot showed that the present diversity in the Japanese archipelago potentially reflects the differentiation of lineages within the islands after the development of the Japanese archipelago.
Although additional taxon sampling and genetic analysis focused on each lineage are needed, our results suggest that immigration from multiple routes just prior to the development of the Japanese archipelago and subsequent diversification within the islands are major causes of the present-day diversity of the Japanese planorbid fauna.
To make sense of a sentence, we must compute morphosyntactic and semantic–thematic relationships between its verbs and arguments and evaluate the resulting propositional meaning against any preceding ...context and our real-world knowledge. Recent electrophysiological studies suggest that, in comparison with non-violated verbs (e.g. “
…at breakfast the boys would eat…”), animacy semantic–thematically violated verbs (e.g. “
…at breakfast the eggs would eat…”) and morphosyntactically violated verbs (e.g. “
…at breakfast the boys would eats…”) evoke a similar neural response. This response is distinct from that evoked by verbs that only violate real-world knowledge (e.g. “
…at breakfast the boys would plant…”). Here we used fMRI to examine the neuroanatomical regions engaged in response to these three violations. Real-world violations, relative to other sentence types, led to increased activity within the left anterior inferior frontal cortex, reflecting participants’ increased and prolonged efforts to retrieve semantic knowledge about the likelihood of events occurring in the real world. In contrast, animacy semantic–thematic violations of the actions depicted by the central verbs engaged a frontal/inferior parietal/basal ganglia network known to mediate the execution and comprehension of goal-directed action. We suggest that the recruitment of this network reflected a semantic–thematic combinatorial process that involved an attempt to determine whether the actions described by the verbs could be executed by their NP Agents. Intriguingly, this network was also activated to morphosyntactic violations between the verbs and their subject NP arguments. Our findings support the pattern of electrophysiological findings in suggesting (a) that a clear division within the semantic system plays out during sentence comprehension, and (b) that semantic–thematic and syntactic violations of verbs within simple active sentences are treated similarly by the brain.
Uncoupling between molecular and morphological evolution is common in many animal and plant lineages. This is especially frequent among groups living in ancient deep lakes, because these ecosystems ...promote rapid morphological diversification, and has already been demonstrated for Tanganyika cychlid fishes and Baikal amphipods. Ostracods are also very diverse in these ecosystems, with 107 candonid species described so far from Baikal, majority of them in the genera
Baird, 1845 and
Kaufmann, 1900. Here we study their morphological and molecular diversity based on four genes (two nuclear and two mitochondrial), 10 species from the lake, and 28 other species from around the world. The results of our phylogenetic analysis based on a concatenated data set, along with sequence diversity, support only two genetic lineages in the lake and indicate that a majority of the Baikal
and
species should be excluded from these genera. We describe a new genus,
, to include five Baikal species, all redescribed here. We also amend the diagnosis for the endemic genus
Mazepova, 1972 and redescribe two species. Our study confirms an exceptional morphological diversity of Lake Baikal candonids and shows that both Baikal lineages are closely related to
, but only distantly to
.
Lake Baikal is the deepest, oldest and most speciose ancient lake in the world. The lake is characterized by high levels of molluscan species richness and endemicity, including the limpet family ...Acroloxidae with 25 endemic species. Members of this group generally inhabit the littoral zone, but have been recently found in the abyssal zone at hydrothermal vents and oil-seeps. Here, we use mitochondrial and nuclear data to provide a first molecular phylogeny of the Lake Baikal limpet radiation, and to date the beginning of intra-lacustrine diversification. Divergence time estimates suggest a considerably younger age for the species flock compared with lake age estimates, and the beginning of extensive diversification is possibly related to rapid deepening and cooling during rifting. Phylogenetic relationships and divergence time estimates do not clearly indicate when exactly the abyssal was colonized but suggest a timeframe coincident with the formation of the abyssal in the northern basin (Middle to Late Pleistocene).
Alzheimer's disease (AD) is a prevalent neurodegenerative condition that can lead to severe cognitive and functional deterioration. Functional magnetic resonance imaging (fMRI) revealed abnormalities ...in AD in intrinsic synchronization between spatially separate regions in the so-called default mode network (DMN) of the brain. To understand the relationship between this disruption in large-scale synchrony and the cognitive impairment in AD, it is critical to determine whether and how the deficit in the low frequency hemodynamic fluctuations recorded by fMRI translates to much faster timescales of memory and other cognitive processes. The present study employed magnetoencephalography (MEG) and a Hidden Markov Model (HMM) approach to estimate spontaneous synchrony variations in the functional neural networks with high temporal resolution. In a group of cognitively healthy (CH) older adults, we found transient (mean duration of 150–250 ms) network activity states, which were visited in a rapid succession, and were characterized by spatially coordinated changes in the amplitude of source-localized electrophysiological oscillations. The inferred states were similar to those previously observed in younger participants using MEG, and the estimated cortical source distributions of the state-specific activity resembled the classic functional neural networks, such as the DMN. In patients with AD, inferred network states were different from those of the CH group in short-scale timing and oscillatory features. The state of increased oscillatory amplitudes in the regions overlapping the DMN was visited less often in AD and for shorter periods of time, suggesting that spontaneous synchronization in this network was less likely and less stable in the patients. During the visits to this state, in some DMN nodes, the amplitude change in the higher-frequency (8–30 Hz) oscillations was less robust in the AD than CH group. These findings highlight relevance of studying short-scale temporal evolution of spontaneous activity in functional neural networks to understanding the AD pathophysiology. Capacity of flexible intrinsic synchronization in the DMN may be crucial for memory and other higher cognitive functions. Our analysis yielded metrics that quantify distinct features of the neural synchrony disorder in AD and may offer sensitive indicators of the neural network health for future investigations.
•Resting MEG to estimate cortical electrophysiological oscillations in older adults.•Hidden Markov model (HMM) applied to time-courses of oscillatory amplitudes.•HMM inferred sequential transitions between ten underlying network synchrony states.•Visits to HMM state short-lived but resembled large-scale networks described by fMRI.•In Alzheimer's, less frequent, less robust synchronizations in default mode network.
Recent event-related potential studies report a P600 effect to incongruous verbs preceded by semantically associated inanimate noun–phrase (NP) arguments, e.g., “
eat” in “
At breakfast the eggs ...would eat…”. This P600 effect may reflect the processing cost incurred when semantic–thematic relationships between critical verbs and their preceding NP argument(s) bias towards different interpretations to those dictated by their sentences’ syntactic structures. We have termed such violations of alternative thematic roles, ‘thematic role violations.’ Semantic–thematic relationships are influenced both by semantic associations and by more basic semantic features, such as a noun’s animacy. This study determined whether a P600 effect can be evoked by verbs whose thematic structures are violated by their preceding inanimate NP arguments, even in the absence of close semantic–associative relationships with these arguments or their preceding contexts. ERPs were measured to verbs under four conditions: (1) non-violated (“
At breakfast the boys would eat…”); (2) preceded by introductory clauses and animate NPs that violated their pragmatic expectations but not their thematic structures (“
At breakfast the boys would plant…”); (3) preceded by semantically related contexts but inanimate NPs that violated their thematic structures (“
At breakfast the eggs would eat…”); (4) preceded by semantically unrelated contexts and inanimate NPs that also violated their thematic structures (“
At breakfast the eggs would plant…”). Pragmatically non-thematic role violated verbs preceded by unrelated contexts and animate NPs evoked robust N400 effects and small P600 effects. Thematically violated verbs preceded by inanimate argument NPs evoked robust P600 effects but no N400 effects, regardless of whether these inanimate arguments or their preceding contexts were semantically related or unrelated to these verbs. These findings suggest that semantic-thematic relations, related to animacy constraints on verbs’ arguments, are computed online and can immediately impact verb processing within active, English sentences.
PDF
