E-viri
Recenzirano
-
Hao, FanChang; Zhang, Melvin; Leong, Hon Wai
IEEE/ACM transactions on computational biology and bioinformatics, 2019-Sept.-Oct.-1, 2019 Sep-Oct, 2019-9-1, 20190901, Letnik: 16, Številka: 5Journal Article
We consider the problem of sorting signed permutations by reversals, transpositions, transreversals, and block-interchanges and give a 2-approximation scheme, called the GSB (Genome Sorting by Bridges) scheme. Our result extends 2-approximation algorithm of He and Chen 12 that allowed only reversals and block-interchanges, and also the 1.5 approximation algorithm of Hartman and Sharan 11 that allowed only transreversals and transpositions. We prove this result by introducing three bridge structures in the breakpoint graph, namely, the L-bridge, T-bridge, and X-bridge and show that they model "proper" reversals, transpositions, transreversals, and block-interchanges, respectively. We show that we can always find at least one of these three bridges in any breakpoint graph, thus giving an upper bound on the number of operations needed. We prove a lower bound on the distance and use it to show that GSB has a 2-approximation ratio. An O(n 3 ) algorithm called GSB-I that is based on the GSB approximation scheme presented in this paper has recently been published by Yu, Hao, and Leong in 17 . We note that our 2-approximation scheme admits many possible implementations by varying the order we search for proper rearrangement operations.
Vnos na polico
Trajna povezava
- URL:
Faktor vpliva
Dostop do baze podatkov JCR je dovoljen samo uporabnikom iz Slovenije. Vaš trenutni IP-naslov ni na seznamu dovoljenih za dostop, zato je potrebna avtentikacija z ustreznim računom AAI.
Leto | Faktor vpliva | Izdaja | Kategorija | Razvrstitev | ||||
---|---|---|---|---|---|---|---|---|
JCR | SNIP | JCR | SNIP | JCR | SNIP | JCR | SNIP |
Baze podatkov, v katerih je revija indeksirana
Ime baze podatkov | Področje | Leto |
---|
Povezave do osebnih bibliografij avtorjev | Povezave do podatkov o raziskovalcih v sistemu SICRIS |
---|
Vir: Osebne bibliografije
in: SICRIS
To gradivo vam je dostopno v celotnem besedilu. Če kljub temu želite naročiti gradivo, kliknite gumb Nadaljuj.