Precise center-detection of tropical cyclones (TCs) is critical for dynamic analysis in high resolution model data. The existence of both smaller scale perturbations and larger scale circulations could reduce the accuracy of center positioning. In this study, an objective center-finding algorithm is developed based on a two-dimensional Fourier filter and a vorticity centroid algorithm. This proposed algorithm is able to automatically adjust its parameters according to the scale of the target vortex instead of using artificially prescribed parameters in previous research. What’s more, this new algorithm has been optimized and validated by a hundred idealized vortexes with different sizes and small-scale perturbations. A high-resolution simulation of Typhoon Soudelor (2015) was used to evaluate the performance of the new algorithm, and the proposed objective center-finding algorithm was found able to detect a precise and reliable center.