This study investigated the performance of hydrophobic surface treatment by using silica aerogel powder via spray coating techniques. Hydrophobic properties were determined by measuring the level of the contact angle. Meanwhile, performance was evaluated in term of the hydrogen gas flow and humidity rejection. The results are shown by contact angle that the microstructure filter, especially in the upper layer and sub-layer has been changed. The results also show an increase of hydrophobicity due to the increased quantity of silica aerogel powder. Results also showed that the absorption and rejection filter performance filter has increased after the addition of silica aerogel powder. The results showed that with the addition of 5 grams of powder of silica aerogel have the highest result of wetting angle 134.11°. The highest humidity rejection found with 5 grams of powder of silica aerogel.